Uses of Class
jebl.evolution.align.Output

Packages that use Output

jebl.evolution.align

Provides classes and interfaces for pairwise alignment of two sequences.

Uses of Output in jebl.evolution.align

Methods in jebl.evolution.align with parameters of type Output

void	Align.doMatch(Output out, String msg) Print the score and the alignment
void	Align.doMatch(Output out, String msg, boolean outputFMatrix) Print the score, the F matrix, and the alignment
abstract void	Align.printf(Output out) Print the matrix (matrices) used to compute the alignment
void	NonOverlapMultipleLocalAffine.printf(Output out) Print matrix used to calculate this alignment.