Java Evolutionary Biology Library

Packages

jebl.evolution.align	Provides classes and interfaces for pairwise alignment of two sequences.
jebl.evolution.align.scores
jebl.evolution.aligners
jebl.evolution.alignments
jebl.evolution.characterReconstruction
jebl.evolution.characters
jebl.evolution.coalescent
jebl.evolution.distances
jebl.evolution.graphs
jebl.evolution.io
jebl.evolution.parsimony
jebl.evolution.sequences
jebl.evolution.substmodel
jebl.evolution.taxa
jebl.evolution.trees
jebl.gui.trees.treecomponent
jebl.gui.trees.treeviewer
jebl.gui.trees.treeviewer_dev
jebl.gui.trees.treeviewer_dev.decorators
jebl.gui.trees.treeviewer_dev.painters
jebl.gui.trees.treeviewer_dev.treelayouts
jebl.gui.trees.treeviewer.decorators
jebl.gui.trees.treeviewer.painters
jebl.gui.trees.treeviewer.treelayouts
jebl.math
jebl.util
org.virion.jam.app
org.virion.jam.components
org.virion.jam.console
org.virion.jam.controlpalettes
org.virion.jam.controlpanels
org.virion.jam.demo
org.virion.jam.demo.menus
org.virion.jam.disclosure
org.virion.jam.framework
org.virion.jam.html
org.virion.jam.layouts
org.virion.jam.mac
org.virion.jam.maconly
org.virion.jam.panels
org.virion.jam.preferences
org.virion.jam.table
org.virion.jam.toolbar
org.virion.jam.util