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| Interface Summary | |
|---|---|
| AlignmentExporter | |
| AlignmentImporter | |
| DistanceMatrixImporter | |
| ImmediateSequenceImporter | A sequence importer sending the sequences back one by one, which makes it possible to import larger documents if handled wisely on the other side. |
| ImmediateSequenceImporter.Callback | |
| SequenceExporter | |
| SequenceImporter | Interface for importers that do sequences |
| TreeExporter | |
| TreeImporter | Interface for importers that do trees |
| Class Summary | |
|---|---|
| ByteBuilder | |
| FastaExporter | Class for exporting a fasta file format. |
| FastaImporter | Class for importing Fasta sequential file format. |
| ImportHelper | A helper class for phylogenetic file format importers |
| MEGAExporter | * Export to MEGA. |
| NewickExporter | |
| NewickImporter | |
| NexusExporter | Export sequences and trees to Nexus format. |
| NexusImporter | Class for importing NEXUS file format |
| PHYLIPExporter | Export alignment to Phylip format. |
| PhylipSequentialImporter | Class for importing PHYLIP sequential file format |
| TabDelimitedImporter | |
| Enum Summary | |
|---|---|
| DistanceMatrixImporter.Triangle | |
| NexusImporter.NexusBlock | |
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