Hierarchy For Package jebl.evolution.io

Package Hierarchies:

All Packages

Class Hierarchy

• java.lang.Object
  • jebl.evolution.io.ByteBuilder (implements java.lang.CharSequence)
  • jebl.evolution.io.FastaExporter (implements jebl.evolution.io.SequenceExporter)
  • jebl.evolution.io.FastaImporter (implements jebl.evolution.io.ImmediateSequenceImporter, jebl.evolution.io.SequenceImporter)
  • jebl.evolution.io.ImportHelper
  • jebl.evolution.io.MEGAExporter (implements jebl.evolution.io.AlignmentExporter)
  • jebl.evolution.io.NewickExporter (implements jebl.evolution.io.TreeExporter)
  • jebl.evolution.io.NewickImporter (implements jebl.evolution.io.TreeImporter)
  • jebl.evolution.io.NexusExporter (implements jebl.evolution.io.AlignmentExporter, jebl.evolution.io.SequenceExporter, jebl.evolution.io.TreeExporter)
  • jebl.evolution.io.NexusImporter (implements jebl.evolution.io.AlignmentImporter, jebl.evolution.io.DistanceMatrixImporter, jebl.evolution.io.SequenceImporter, jebl.evolution.io.TreeImporter)
  • jebl.evolution.io.PHYLIPExporter (implements jebl.evolution.io.AlignmentExporter)
  • jebl.evolution.io.PhylipSequentialImporter (implements jebl.evolution.io.SequenceImporter)
  • jebl.evolution.io.TabDelimitedImporter (implements jebl.evolution.io.DistanceMatrixImporter)
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • jebl.evolution.io.ImportException
        • jebl.evolution.io.ImportException.BadFormatException
        • jebl.evolution.io.ImportException.DuplicateFieldException
        • jebl.evolution.io.ImportException.DuplicateTaxaException
        • jebl.evolution.io.ImportException.MissingFieldException
        • jebl.evolution.io.ImportException.ShortSequenceException
        • jebl.evolution.io.ImportException.TooFewTaxaException
        • jebl.evolution.io.ImportException.UnknownTaxonException
        • jebl.evolution.io.ImportException.UnparsableDataException
        • jebl.evolution.io.NexusImporter.MissingBlockException

Interface Hierarchy

• jebl.evolution.io.AlignmentExporter
• jebl.evolution.io.AlignmentImporter
• jebl.evolution.io.DistanceMatrixImporter
• jebl.evolution.io.ImmediateSequenceImporter
• jebl.evolution.io.ImmediateSequenceImporter.Callback
• java.lang.Iterable<T>
  • jebl.evolution.io.TreeImporter
• jebl.evolution.io.SequenceExporter
• jebl.evolution.io.SequenceImporter
• jebl.evolution.io.TreeExporter

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • jebl.evolution.io.NexusImporter.NexusBlock
    • jebl.evolution.io.DistanceMatrixImporter.Triangle