jebl.evolution.io
Class PhylipSequentialImporter

java.lang.Object
  jebl.evolution.io.PhylipSequentialImporter

All Implemented Interfaces:

SequenceImporter

public class PhylipSequentialImporter
extends Object
implements SequenceImporter

Class for importing PHYLIP sequential file format

Author:

Andrew Rambaut, Alexei Drummond

Constructor Summary

PhylipSequentialImporter(Reader reader, SequenceType sequenceType, int maxNameLength)
Constructor

Method Summary

List<Sequence>

importSequences() importSequences.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PhylipSequentialImporter

public PhylipSequentialImporter(Reader reader,
                                SequenceType sequenceType,
                                int maxNameLength)

Constructor

Method Detail

importSequences

public List<Sequence> importSequences()
                               throws IOException,
                                      ImportException

importSequences.

Specified by:

importSequences in interface SequenceImporter

Throws:

IOException

ImportException