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jebl.evolution.alignments
Interface Alignment

All Superinterfaces:
Patterns, Sequences
All Known Implementing Classes:
BasicAlignment, BootrappedAlignment, JackknifedAlignment, ResampledAlignment
public interface Alignment
extends Sequences, Patterns

Author:
Andrew Rambaut, Alexei Drummond

Method Summary
 List<Sequence> getSequenceList()
           
 int getSiteCount()
           
 
Methods inherited from interface jebl.evolution.sequences.Sequences
getSequence, getSequences
 
Methods inherited from interface jebl.evolution.alignments.Patterns
getPatternCount, getPatternLength, getPatterns, getSequenceType, getTaxa
 

Method Detail

getSequenceList

List<Sequence> getSequenceList()

getSiteCount

int getSiteCount()
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