jebl.gui.trees.treeviewer.treelayouts
Class RectilinearTreeLayout

java.lang.Object
  jebl.gui.trees.treeviewer.treelayouts.AbstractTreeLayout
      jebl.gui.trees.treeviewer.treelayouts.RectilinearTreeLayout

All Implemented Interfaces:

TreeLayout, ControlsProvider

public class RectilinearTreeLayout
extends AbstractTreeLayout

Author:

Andrew Rambaut

Nested Class Summary

Nested classes/interfaces inherited from interface jebl.gui.trees.treeviewer.treelayouts.TreeLayout

TreeLayout.AxisType

Field Summary

Fields inherited from class jebl.gui.trees.treeviewer.treelayouts.AbstractTreeLayout

branchLabelPaths, branchPaths, calloutPaths, nodeLabelPaths, nodePoints, taxonLabelPaths, tree

Constructor Summary

RectilinearTreeLayout()

Method Summary

List<Controls>	getControls(boolean detachPrimaryCheckbox) Get a list of Controls handled by this provider.
Shape	getHeightArea(double height1, double height2) Return a shape that defines a particular height interval.
Line2D	getHeightLine(double height) Return a line that defines a particular height.
double	getHeightOfPoint(Point2D point) Return the height (from the youngest tip) for the given 2d point.
void	getSettings(ControlsSettings settings) Get the settings for a given Controls object.
TreeLayout.AxisType	getXAxisType() Return whether the x axis is continuous or discrete
TreeLayout.AxisType	getYAxisType() Return whether the y axis is continuous or discrete
boolean	maintainAspectRatio() Return whether the two axis scales should be maintained relative to each other
void	setAlignTaxonLabels(boolean alignTaxonLabels)
void	setBranchCurveProportion(double xProportion, double yProportion)
void	setControlPalette(ControlPalette controlPalette) Give the controls provider with a handle for the controlPalette object.
void	setRootLength(double rootLength)
void	setSettings(ControlsSettings settings) Give the provider some settings.
protected void	validate()

Methods inherited from class jebl.gui.trees.treeviewer.treelayouts.AbstractTreeLayout

addTreeLayoutListener, fireTreeLayoutChanged, getBranchLabelPath, getBranchPath, getCalloutPath, getNodeLabelPath, getNodePoint, getTaxonLabelPath, invalidate, removeTreeLayoutListener, setTree

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

RectilinearTreeLayout

public RectilinearTreeLayout()

Method Detail

getXAxisType

public TreeLayout.AxisType getXAxisType()

Description copied from interface: TreeLayout

Return whether the x axis is continuous or discrete

Returns:

the axis type

getYAxisType

public TreeLayout.AxisType getYAxisType()

Description copied from interface: TreeLayout

Return whether the y axis is continuous or discrete

Returns:

the axis type

maintainAspectRatio

public boolean maintainAspectRatio()

Description copied from interface: TreeLayout

Return whether the two axis scales should be maintained relative to each other

Returns:

a boolean

getHeightOfPoint

public double getHeightOfPoint(Point2D point)

Description copied from interface: TreeLayout

Return the height (from the youngest tip) for the given 2d point. Some layouts won't be able to produce this and may throw an UnsupportedOperationException.

Returns:

the height

getHeightLine

public Line2D getHeightLine(double height)

Description copied from interface: TreeLayout

Return a line that defines a particular height. Some layouts won't be able to produce this and may throw an UnsupportedOperationException.

Returns:

the line

getHeightArea

public Shape getHeightArea(double height1,
                           double height2)

Description copied from interface: TreeLayout

Return a shape that defines a particular height interval. Some layouts won't be able to produce this and may throw an UnsupportedOperationException.

Returns:

the area

setControlPalette

public void setControlPalette(ControlPalette controlPalette)

Description copied from interface: ControlsProvider

Give the controls provider with a handle for the controlPalette object.

getControls

public List<Controls> getControls(boolean detachPrimaryCheckbox)

Description copied from interface: ControlsProvider

Get a list of Controls handled by this provider.

Parameters:

detachPrimaryCheckbox - When false, do nothing. When true, if controls have a "main" on/off switch (implemented as a JCheckBox), that checkbox should not be included in the controls panel but returned in

Returns:

A list of Controls

See Also:

Controls.getPrimaryCheckbox()

setSettings

public void setSettings(ControlsSettings settings)

Description copied from interface: ControlsProvider

Give the provider some settings.

getSettings

public void getSettings(ControlsSettings settings)

Description copied from interface: ControlsProvider

Get the settings for a given Controls object.

setRootLength

public void setRootLength(double rootLength)

setBranchCurveProportion

public void setBranchCurveProportion(double xProportion,
                                     double yProportion)

setAlignTaxonLabels

public void setAlignTaxonLabels(boolean alignTaxonLabels)

validate

protected void validate()

Specified by:

validate in class AbstractTreeLayout