Uses of Interface
jebl.evolution.graphs.Edge

Packages that use Edge

jebl.evolution.graphs
jebl.evolution.trees

Uses of Edge in jebl.evolution.graphs

Methods in jebl.evolution.graphs that return Edge

Edge	Graph.getEdge(Node node1, Node node2) Returns the Edge that connects these two nodes

Methods in jebl.evolution.graphs that return types with arguments of type Edge

Set<Edge>	Graph.getEdges()
List<Edge>	Graph.getEdges(Node node) Returns a list of edges connected to this node

Methods in jebl.evolution.graphs with parameters of type Edge

Node[]

Graph.getNodes(Edge edge) Returns an array of 2 nodes which are the nodes at either end of the edge.

Uses of Edge in jebl.evolution.trees

Methods in jebl.evolution.trees that return Edge

Edge	CompactRootedTree.getEdge(Node node1, Node node2)
Edge	FilteredRootedTree.getEdge(Node node1, Node node2)
Edge	MutableRootedTree.getEdge(Node node1, Node node2) Returns the Edge that connects these two nodes
Edge	RootedFromUnrooted.getEdge(Node node1, Node node2)
Edge	SimpleRootedTree.getEdge(Node node1, Node node2) Returns the Edge that connects these two nodes
Edge	SimpleTree.getEdge(Node node1, Node node2) Returns the Edge that connects these two nodes

Methods in jebl.evolution.trees that return types with arguments of type Edge

Set<Edge>	CompactRootedTree.getEdges()
Set<Edge>	FilteredRootedTree.getEdges()
Set<Edge>	MutableRootedTree.getEdges()
Set<Edge>	RootedFromUnrooted.getEdges()
Set<Edge>	SimpleRootedTree.getEdges()
Set<Edge>	SimpleTree.getEdges()
List<Edge>	CompactRootedTree.getEdges(Node node)
List<Edge>	FilteredRootedTree.getEdges(Node node)
List<Edge>	MutableRootedTree.getEdges(Node node) Returns a list of edges connected to this node
List<Edge>	RootedFromUnrooted.getEdges(Node node) Returns a list of edges connected to this node
List<Edge>	SimpleRootedTree.getEdges(Node node) Returns a list of edges connected to this node
List<Edge>	SimpleTree.getEdges(Node node) Returns a list of edges connected to this node
Set<Edge>	CompactRootedTree.getExternalEdges()
Set<Edge>	FilteredRootedTree.getExternalEdges()
Set<Edge>	MutableRootedTree.getExternalEdges() The set of external edges.
Set<Edge>	RootedFromUnrooted.getExternalEdges() The set of external edges.
Set<Edge>	SimpleRootedTree.getExternalEdges() The set of external edges.
Set<Edge>	SimpleTree.getExternalEdges() The set of external edges.
Set<Edge>	Tree.getExternalEdges()
Set<Edge>	CompactRootedTree.getInternalEdges()
Set<Edge>	FilteredRootedTree.getInternalEdges()
Set<Edge>	MutableRootedTree.getInternalEdges() The set of internal edges.
Set<Edge>	RootedFromUnrooted.getInternalEdges() The set of internal edges.
Set<Edge>	SimpleRootedTree.getInternalEdges() The set of internal edges.
Set<Edge>	SimpleTree.getInternalEdges() The set of internal edges.
Set<Edge>	Tree.getInternalEdges()

Methods in jebl.evolution.trees with parameters of type Edge

Node[]	CompactRootedTree.getNodes(Edge edge)
Node[]	FilteredRootedTree.getNodes(Edge edge)
Node[]	MutableRootedTree.getNodes(Edge edge) Returns an array of 2 nodes which are the nodes at either end of the edge.
Node[]	RootedFromUnrooted.getNodes(Edge edge)
Node[]	SimpleRootedTree.getNodes(Edge edge) Returns an array of 2 nodes which are the nodes at either end of the edge.
Node[]	SimpleTree.getNodes(Edge edge) Returns an array of 2 nodes which are the nodes at either end of the edge.
static void	SplitUtils.getSplit(List<Taxon> taxa, Tree tree, Edge edge, boolean[] split) get split for branch associated with internal node
boolean	SimpleTree.isExternal(Edge edge)