Uses of Package
jebl.evolution.alignments

Packages that use jebl.evolution.alignments

jebl.evolution.align	Provides classes and interfaces for pairwise alignment of two sequences.
jebl.evolution.aligners
jebl.evolution.alignments
jebl.evolution.distances
jebl.evolution.io
jebl.evolution.parsimony

Classes in jebl.evolution.alignments used by jebl.evolution.align

Alignment

Classes in jebl.evolution.alignments used by jebl.evolution.aligners

Alignment

Classes in jebl.evolution.alignments used by jebl.evolution.alignments

Alignment

BasicAlignment
A basic implementation of the Alignment interface.

Pattern
An interface representing a list of states for a list of taxa.

Patterns
An interface representing a set of site patterns.

ResampledAlignment
Date: 17/01/2006 Time: 08:08:44

Classes in jebl.evolution.alignments used by jebl.evolution.distances

Alignment

Classes in jebl.evolution.alignments used by jebl.evolution.io

Alignment

Classes in jebl.evolution.alignments used by jebl.evolution.parsimony

Pattern
An interface representing a list of states for a list of taxa.

Patterns
An interface representing a set of site patterns.