Hierarchy For Package jebl.evolution.trees

Package Hierarchies:

All Packages

Class Hierarchy

• java.lang.Object
  • jebl.evolution.trees.CladeSystem
  • jebl.evolution.trees.ClusteringTreeBuilder<T> (implements jebl.evolution.trees.TreeBuilder<T>)
    • jebl.evolution.trees.NeighborJoiningTreeBuilder
  • jebl.evolution.trees.CompactRootedTree (implements jebl.evolution.trees.RootedTree)
  • jebl.evolution.trees.ConsensusTreeBuilder<T> (implements jebl.evolution.trees.TreeBuilder<T>)
    • jebl.evolution.trees.GreedyRootedConsensusTreeBuilder
    • jebl.evolution.trees.GreedyUnrootedConsensusTreeBuilder
    • jebl.evolution.trees.MRCACConsensusTreeBuilder
  • jebl.evolution.trees.FilteredRootedTree (implements jebl.evolution.trees.RootedTree)
    • jebl.evolution.trees.SortedRootedTree
    • jebl.evolution.trees.TransformedRootedTree
  • jebl.evolution.trees.MutableRootedTree (implements jebl.evolution.trees.RootedTree)
  • jebl.evolution.trees.RootedFromUnrooted (implements jebl.evolution.trees.RootedTree)
  • jebl.evolution.trees.RootedTreeUtils
  • jebl.evolution.trees.SimpleRootedTree (implements jebl.evolution.trees.RootedTree)
  • jebl.evolution.trees.SimpleTree (implements jebl.evolution.trees.Tree)
  • jebl.evolution.trees.SplitSystem
  • jebl.evolution.trees.SplitUtils
  • jebl.evolution.trees.TreeBuilderFactory
  • jebl.evolution.trees.TreeSimulator
  • jebl.evolution.trees.Utils

Interface Hierarchy

• jebl.util.Attributable
  • jebl.evolution.graphs.Graph
    • jebl.evolution.trees.Tree
      • jebl.evolution.trees.RootedTree
• jebl.evolution.trees.IntervalGenerator
• jebl.evolution.trees.TreeBuilder<T>

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • jebl.evolution.trees.TreeBuilderFactory.Method
    • jebl.evolution.trees.TransformedRootedTree.Transform
    • jebl.evolution.trees.ConsensusTreeBuilder.Method
    • jebl.evolution.trees.TreeBuilderFactory.ConsensusMethod
    • jebl.evolution.trees.SortedRootedTree.BranchOrdering
    • jebl.evolution.trees.TreeBuilderFactory.DistanceModel