Uses of Class
jebl.evolution.trees.TreeBuilderFactory.Method

Packages that use TreeBuilderFactory.Method

jebl.evolution.align	Provides classes and interfaces for pairwise alignment of two sequences.
jebl.evolution.trees

Uses of TreeBuilderFactory.Method in jebl.evolution.align

Methods in jebl.evolution.align with parameters of type TreeBuilderFactory.Method

static AlignmentTreeBuilderFactory.Result	AlignmentTreeBuilderFactory.build(Alignment alignment, TreeBuilderFactory.Method method, TreeBuilderFactory.DistanceModel model, ProgressListener progress)
static AlignmentTreeBuilderFactory.Result	AlignmentTreeBuilderFactory.build(List<Sequence> seqs, TreeBuilderFactory.Method method, MultipleAligner aligner, ProgressListener progress)
static AlignmentTreeBuilderFactory.Result	AlignmentTreeBuilderFactory.build(List<Sequence> seqs, TreeBuilderFactory.Method method, PairwiseAligner aligner, ProgressListener progress)

Uses of TreeBuilderFactory.Method in jebl.evolution.trees

Methods in jebl.evolution.trees that return TreeBuilderFactory.Method

static TreeBuilderFactory.Method	TreeBuilderFactory.Method.valueOf(String name) Returns the enum constant of this type with the specified name.
static TreeBuilderFactory.Method[]	TreeBuilderFactory.Method.values() Returns an array containing the constants of this enum type, in the order they're declared.

Methods in jebl.evolution.trees with parameters of type TreeBuilderFactory.Method

static ClusteringTreeBuilder	ClusteringTreeBuilder.getBuilder(TreeBuilderFactory.Method method, DistanceMatrix distances) A factory method to create a ClusteringTreeBuilder
static ClusteringTreeBuilder	TreeBuilderFactory.getBuilder(TreeBuilderFactory.Method method, DistanceMatrix distances)
static boolean	TreeBuilderFactory.isRootedMethod(TreeBuilderFactory.Method method)